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Recent news

Wednesday, Aug 10th, 2016
Moving the blog to MathCancer.org: Hi, everyone!Blogspot has been a great platform for me, but in the end, editing posts with source code and mathematics has been too much of ... [read more]

Wednesday, Feb 24th, 2016
Saving MultiCellDS data from BioFVM: Note: This is the fifth in a series of "how-to" blog posts to help new users and developers of BioFVM. IntroductionA major initiative for my lab ... [read more]

MultiCellDB: Static Portal

MultiCellDB is currently undergoing a major software upgrade and customizations at the USC Information Sciences Institute. After the upgrade and customizations are complete, this portal will be supplemented with the newer portal. Please see http://portals.MultiCellDS.org. The data on this static portal represent the initial MultiCellDB repository in December 2016.

See http://portals.MultiCellDS.org for a list of other portals to MultiCellDB.

Please note that we will continue adding data to this repository over the next few weeks.
   — P. Macklin, Dec. 9, 2016

Versioning Information

This static portal is current as of December 7, 2016. It will be replaced by newly indexed data on occasion. The "master" data can be accessed directly at gitlab, at:


Main Collections: Digital Cell Lines

MultiCellDB_ID Name Count Description and notes
pending DCIS 17 Patient-derived digital cell lines for ductal carcinoma in situ (DCIS)
pending ATCC 38 Basic digital cell lines derived from ATCC protocols
pending GBM 172 Patient-derived glioblastoma digital cell lines
pending PSON 2 Detailed MCF-10A and MDA-MB-231 digital cell lines from the NCI Physical Sciences in Oncology Network (populating data)
pending Other 25 Other digital cell lines
pending All 235 All digital cell lines

Main Collections: Digital Snapshots

MultiCellDB_ID Name Count Description and notes
pending Breast pathology 327 Segmented breast pathology with clinical annotations